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<knimeNode icon="generic_node.png" type="Manipulator">
    <name>QCShrinker</name>
    
    <shortDescription>
        This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.
    </shortDescription>
    
    <fullDescription>
        <intro><p>This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.</p>
		<p>
			<a href="http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCShrinker.html">Web Documentation for QCShrinker</a>
		</p>

        </intro>
        
		<option name="version">Version of the tool that generated this parameters file.</option>
		<option name="qp_accessions">A list of cv accessions that should be removed. If empty, the usual suspects will be removed!</option>
		<option name="name">The name of the target run or set that contains the requested quality parameter.</option>
		<option name="log">Name of log file (created only when specified)</option>
		<option name="debug">Sets the debug level</option>
		<option name="threads">Sets the number of threads allowed to be used by the TOPP tool</option>
		<option name="no_progress">Disables progress logging to command line</option>
		<option name="force">Overwrite tool specific checks.</option>
		<option name="test">Enables the test mode (needed for internal use only)</option>

    </fullDescription>
    
    <ports>
		<inPort index="0" name="in [qcML]">Input qcml file [qcML]</inPort>
		<inPort index="1" name="run [mzML]">The file from which the name of the target run that contains the requested quality parameter is taken. This overrides the name parameter! [mzML,opt.]</inPort>
		<outPort index="0" name="out [qcML]">Output extended/reduced qcML file [qcML]</outPort>
 </ports>
    <views>
        <view index="0" name="QCShrinker Std Output">The text sent to standard out during the execution of QCShrinker.</view>
        <view index="1" name="QCShrinker Error Output">The text sent to standard error during the execution of QCShrinker. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)</view>
    </views>    
</knimeNode>
