Input files to transform (separated by blanks) [mzML,featureXML,consensusXML,idXML,opt.]Transformations to apply (files separated by blanks) [trafoXML]Output files separated by blanks. Either this option or 'trafo_out' have to be provided. They can be used together. [mzML,featureXML,consensusXML,idXML]Transformation output files separated by blanks. Either this option or 'out' have to be provided. They can be used together. [trafoXML]The text sent to standard out during the execution of MapRTTransformer.The text sent to standard error during the execution of MapRTTransformer. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)