input file [idXML]filename of a FASTA file containing protein sequences.#br#All peptides that are not a substring of a sequence in this file are removed#br#All proteins whose accession is not present in this file are removed. [fasta,opt.]Peptides having the same sequence and modification assignment as any peptide in this file will be filtered out. Use with blacklist:ignore_modification flag to only compare by sequence.#br# [idXML,opt.]output file [idXML]The text sent to standard out during the execution of IDFilter.The text sent to standard error during the execution of IDFilter. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)