Input database file [fasta]Input file(s) holding experimental data [idXML,consensusXML,opt.]Text file containing the experimental design. See documentation for specific format requirements [txt,opt.]output file. Contains all protein groups [csv]output file. Contains one peptide per line and all proteins which contain that peptide [csv]output file. Contains one protein per line [csv]output file for additional info [csv]The text sent to standard out during the execution of ProteinResolver.The text sent to standard error during the execution of ProteinResolver. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)